Dec 30, 2019
MACSNVdb is an open-access SNV database comprising ~74.51 million high-quality non-redundant SNVs called from 20 macaques that may assist researchers to investigate interspecies genetic divergence between macaques. MACSNVdb allows users to browse and retrieve individual, sepcific and non-redundant SNVs. In particular, users can retrieve non-synonymous SNVs that may have deleterious effects on protein structure or function within macaque orthologs of human disease and drug-target genes. MACSNVdb also integrates gene functional annotation information including GO term, KEGG pathway, Pfam and InterPro domains.
This work was supported by the National Natural Science Foundation of China (31501871 and 31530068), the Start-up Fund of Chengdu University (2081916062), the Key Research Fund on Sciences and Technologies for Joint Academic Institute and Local Enterprises of Sichuan (2018JZ0008), and partly funded by the Fundamental Research Funds for the Central Universities (2012017yjsy153).
Database developer Lianming Du (firstname.lastname@example.org) and Zhenxin Fan (email@example.com)
Dec 30, 2019
Oct 14, 2018
Jul 16, 2018
May 8, 2018
|Individual SNVs||193 129 390|
|Non-redundant SNVs||74 506 801|
|Group-specific SNVs||5 221 789|
|Species-specific SNVs||6 766 099|
|SNVs in CDS||486 697|
|Nonsynonymous SNVs||209 064|